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User:ProteinBoxBot/ASU 20080409D-6

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Log file for Protein Box Bot

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Log page index: User:ProteinBoxBot/PBB_Log_Index

Protein Status Quick Log - Date: 02:14, 10 April 2008 (UTC)

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Proteins with a High Potential Match (1)

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FRAS1

Redirected Proteins (24)

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TSEN34 MOGAT2 GALNT14 BAT4 GPR177
EPS8L3 RIC3 RNF128 ULBP3 DSN1
RHBDF2 NOL12 ASB13 LRRC8E ARMET
DHDDS OTUB2 C15orf29 FLJ12529 ASRGL1
C9orf82 GEMIN7 IPO4 NOL9

Created (23)

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TSEN34 MOGAT2 GALNT14 BAT4 GPR177
EPS8L3 RIC3 RNF128 ULBP3 DSN1
RHBDF2 NOL12 ASB13 LRRC8E ARMET
DHDDS OTUB2 C15orf29 FLJ12529 ASRGL1
C9orf82 IPO4 NOL9

Manual Inspection (Page not found) (1)

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FRAS1

Updated (1)

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GEMIN7


Protein Status Grid - Date: 02:14, 10 April 2008 (UTC)

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HUGO Symbol Action Summary Target page(s) WP Symbol Search
TSEN34 Created Location: TSEN34; [1]
MOGAT2 Created Location: MOGAT2; [2]
GALNT14 Created Location: GALNT14; [3]
BAT4 Created Location: BAT4; [4]
GPR177 Created Location: GPR177; [5]
EPS8L3 Created Location: EPS8L3; [6]
RIC3 Created Location: RIC3; [7]
RNF128 Created Location: RNF128; [8]
ULBP3 Created Location: ULBP3; [9]
DSN1 Created Location: DSN1; [10]
RHBDF2 Created Location: RHBDF2; [11]
NOL12 Created Location: NOL12; [12]
FRAS1 Manual Inspection (Page not found) Other Pages: Fraser syndrome 1 (No Data); FRAS1 (Protein Template); DKFZp686I05113 (No Data); Dkfzp686i05113 (No Data); DKFZp686P08111 (No Data); Dkfzp686p08111 (No Data); FLJ14927 (No Data); Flj14927 (No Data); FLJ22031 (No Data); Flj22031 (No Data); KIAA1500 (No Data); Kiaa1500 (No Data); [13]
ASB13 Created Location: ASB13; [14]
LRRC8E Created Location: LRRC8E; [15]
ARMET Created Location: ARMET; [16]
DHDDS Created Location: DHDDS; [17]
OTUB2 Created Location: OTUB2; [18]
C15orf29 Created Location: C15orf29; [19]
FLJ12529 Created Location: FLJ12529; [20]
ASRGL1 Created Location: ASRGL1; [21]
C9orf82 Created Location: C9orf82; [22]
GEMIN7 Updated Other Pages: Gem associated protein 7 (No Data); GEMIN7 (Redirect -> Gem-associated protein 7); SIP3 (No Data); Sip3 (No Data); Gem-associated protein 7 (Good Codes + Entrez Match); [23]
IPO4 Created Location: IPO4; [24]
NOL9 Created Location: NOL9; [25]

Vebose Log - Date: 02:14, 10 April 2008 (UTC)

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ARMET

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  • INFO: Beginning work on ARMET... {April 9, 2008 6:56:56 PM PDT}
  • REDIRECT: Protein Redirected to: ARMET {April 9, 2008 6:57:21 PM PDT}
  • CREATED: Created new protein page: ARMET {April 9, 2008 6:57:25 PM PDT}

ASB13

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  • INFO: Beginning work on ASB13... {April 9, 2008 7:05:20 PM PDT}
  • REDIRECT: Protein Redirected to: ASB13 {April 9, 2008 7:05:47 PM PDT}
  • CREATED: Created new protein page: ASB13 {April 9, 2008 7:05:52 PM PDT}

ASRGL1

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  • INFO: Beginning work on ASRGL1... {April 9, 2008 7:11:57 PM PDT}
  • REDIRECT: Protein Redirected to: ASRGL1 {April 9, 2008 7:13:35 PM PDT}
  • CREATED: Created new protein page: ASRGL1 {April 9, 2008 7:13:39 PM PDT}

BAT4

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  • INFO: Beginning work on BAT4... {April 9, 2008 6:57:26 PM PDT}
  • REDIRECT: Protein Redirected to: BAT4 {April 9, 2008 6:57:39 PM PDT}
  • CREATED: Created new protein page: BAT4 {April 9, 2008 6:57:43 PM PDT}

C15orf29

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  • INFO: Beginning work on C15orf29... {April 9, 2008 7:06:46 PM PDT}
  • REDIRECT: Protein Redirected to: C15orf29 {April 9, 2008 7:07:15 PM PDT}
  • CREATED: Created new protein page: C15orf29 {April 9, 2008 7:07:19 PM PDT}

C9orf82

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  • INFO: Beginning work on C9orf82... {April 9, 2008 7:08:09 PM PDT}
  • REDIRECT: Protein Redirected to: C9orf82 {April 9, 2008 7:08:45 PM PDT}
  • CREATED: Created new protein page: C9orf82 {April 9, 2008 7:08:49 PM PDT}

DHDDS

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  • INFO: Beginning work on DHDDS... {April 9, 2008 7:08:49 PM PDT}
  • REDIRECT: Protein Redirected to: DHDDS {April 9, 2008 7:09:25 PM PDT}
  • CREATED: Created new protein page: DHDDS {April 9, 2008 7:09:29 PM PDT}

DSN1

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  • INFO: Beginning work on DSN1... {April 9, 2008 7:10:21 PM PDT}
  • REDIRECT: Protein Redirected to: DSN1 {April 9, 2008 7:10:53 PM PDT}
  • CREATED: Created new protein page: DSN1 {April 9, 2008 7:10:59 PM PDT}

EPS8L3

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  • INFO: Beginning work on EPS8L3... {April 9, 2008 7:00:03 PM PDT}
  • UPLOAD: Added new Image to wiki: File:PBB Protein EPS8L3 image.jpg {April 9, 2008 7:00:30 PM PDT}
  • REDIRECT: Protein Redirected to: EPS8L3 {April 9, 2008 7:00:37 PM PDT}
  • CREATED: Created new protein page: EPS8L3 {April 9, 2008 7:00:43 PM PDT}

FLJ12529

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  • INFO: Beginning work on FLJ12529... {April 9, 2008 7:07:19 PM PDT}
  • REDIRECT: Protein Redirected to: FLJ12529 {April 9, 2008 7:08:05 PM PDT}
  • CREATED: Created new protein page: FLJ12529 {April 9, 2008 7:08:09 PM PDT}

FRAS1

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  • INFO: Beginning work on FRAS1... {April 9, 2008 7:11:37 PM PDT}
  • REDIRECT: Page directory gave bad page (FRAS1). Continuing with search.. Please correct entry: <80144,FRAS1>. {April 9, 2008 7:11:49 PM PDT}
  • AMBIGUITY: Did not locate an acceptable page to update. {April 9, 2008 7:11:57 PM PDT} 
 <!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{PBB_Controls
| update_page = yes 
| require_manual_inspection = no 
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}

<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
 | image =  
 | image_source =  
 | PDB = 
 | Name = Fraser syndrome 1
 | HGNCid = 19185
 | Symbol = FRAS1
 | AltSymbols =; DKFZp686I05113; DKFZp686P08111; FLJ14927; FLJ22031; KIAA1500
 | OMIM = 607830
 | ECnumber =  
 | Homologene = 23516
 | MGIid = 2385368
 | Function = {{GNF_GO|id=GO:0005509 |text = calcium ion binding}}{{GNF_GO|id=GO:0005515 |text = protein binding}}
 | Component = {{GNF_GO|id=GO:0005604 |text = basement membrane}} {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}} 
 | Process = {{GNF_GO|id=GO:0002009 |text = morphogenesis of an epithelium}} {{GNF_GO|id=GO:0007154 |text = cell communication}} {{GNF_GO|id=GO:0007156 |text = homophilic cell adhesion}} 
 | Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 80144
    | Hs_Ensembl = ENSG00000138759
    | Hs_RefseqProtein = NP_079350
    | Hs_RefseqmRNA = NM_025074
    | Hs_GenLoc_db =  
    | Hs_GenLoc_chr = 4
    | Hs_GenLoc_start = 79198158
    | Hs_GenLoc_end = 79684446
    | Hs_Uniprot = Q86XX4
    | Mm_EntrezGene = 231470
    | Mm_Ensembl = ENSMUSG00000034687
    | Mm_RefseqmRNA = NM_175473
    | Mm_RefseqProtein = NP_780682
    | Mm_GenLoc_db =  
    | Mm_GenLoc_chr = 5
    | Mm_GenLoc_start = 96614257
    | Mm_GenLoc_end = 97025030
    | Mm_Uniprot = Q8BPP7
  }}
}}
'''Fraser syndrome 1''', also known as '''FRAS1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: FRAS1 Fraser syndrome 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=80144| accessdate = }}</ref>

<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title = 
| summary_text = The FRAS1 gene encodes a putative extracellular matrix (ECM) protein and is mutated in Fraser syndrome (MIM 219000) (McGregor et al., 2003).[supplied by OMIM]<ref name="entrez">{{cite web | title = Entrez Gene: FRAS1 Fraser syndrome 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=80144| accessdate = }}</ref>
}}

==References==
{{reflist}}
==Further reading==
{{refbegin | 2}}
{{PBB_Further_reading 
| citations = 
*{{cite journal  | author=Short K, Wiradjaja F, Smyth I |title=Let's stick together: the role of the Fras1 and Frem proteins in epidermal adhesion. |journal=IUBMB Life |volume=59 |issue= 7 |pages= 427-35 |year= 2007 |pmid= 17654118 |doi= 10.1080/15216540701510581 }}
*{{cite journal  | author=Gattuso J, Patton MA, Baraitser M |title=The clinical spectrum of the Fraser syndrome: report of three new cases and review. |journal=J. Med. Genet. |volume=24 |issue= 9 |pages= 549-55 |year= 1987 |pmid= 3118036 |doi=  }}
*{{cite journal  | author=Long J, Wei Z, Feng W, ''et al.'' |title=Supramodular nature of GRIP1 revealed by the structure of its PDZ12 tandem in complex with the carboxyl tail of Fras1. |journal=J. Mol. Biol. |volume=375 |issue= 5 |pages= 1457-68 |year= 2008 |pmid= 18155042 |doi= 10.1016/j.jmb.2007.11.088 }}
*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal  | author=Takamiya K, Kostourou V, Adams S, ''et al.'' |title=A direct functional link between the multi-PDZ domain protein GRIP1 and the Fraser syndrome protein Fras1. |journal=Nat. Genet. |volume=36 |issue= 2 |pages= 172-7 |year= 2004 |pmid= 14730302 |doi= 10.1038/ng1292 }}
*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal  | author=Vrontou S, Petrou P, Meyer BI, ''et al.'' |title=Fras1 deficiency results in cryptophthalmos, renal agenesis and blebbed phenotype in mice. |journal=Nat. Genet. |volume=34 |issue= 2 |pages= 209-14 |year= 2003 |pmid= 12766770 |doi= 10.1038/ng1168 }}
*{{cite journal  | author=McGregor L, Makela V, Darling SM, ''et al.'' |title=Fraser syndrome and mouse blebbed phenotype caused by mutations in FRAS1/Fras1 encoding a putative extracellular matrix protein. |journal=Nat. Genet. |volume=34 |issue= 2 |pages= 203-8 |year= 2003 |pmid= 12766769 |doi= 10.1038/ng1142 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | author=Nagase T, Kikuno R, Ishikawa K, ''et al.'' |title=Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. |journal=DNA Res. |volume=7 |issue= 2 |pages= 143-50 |year= 2000 |pmid= 10819331 |doi=  }}
}}
{{refend}}

{{protein-stub}}

GALNT14

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  • INFO: Beginning work on GALNT14... {April 9, 2008 7:01:55 PM PDT}
  • REDIRECT: Protein Redirected to: GALNT14 {April 9, 2008 7:02:23 PM PDT}
  • CREATED: Created new protein page: GALNT14 {April 9, 2008 7:02:31 PM PDT}

GEMIN7

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  • INFO: Beginning work on GEMIN7... {April 9, 2008 7:05:52 PM PDT}
  • REDIRECT: Page directory gave bad page (GEMIN7). Continuing with search.. Please correct entry: <79760,GEMIN7>. {April 9, 2008 7:06:38 PM PDT}
  • SEARCH REDIRECT: Control Box Found: Gem-associated protein 7 {April 9, 2008 7:06:41 PM PDT}
  • UPDATE PROTEIN BOX: Updating Protein Box, No errors. {April 9, 2008 7:06:43 PM PDT}
  • UPDATE SUMMARY: Updating Summary, No Errors. {April 9, 2008 7:06:43 PM PDT}
  • UPDATE CITATIONS: Updating Citations, No Errors. {April 9, 2008 7:06:43 PM PDT}
  • UPDATED: Updated protein page: Gem-associated protein 7 {April 9, 2008 7:06:46 PM PDT}

GPR177

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  • INFO: Beginning work on GPR177... {April 9, 2008 7:09:29 PM PDT}
  • REDIRECT: Protein Redirected to: GPR177 {April 9, 2008 7:10:17 PM PDT}
  • CREATED: Created new protein page: GPR177 {April 9, 2008 7:10:21 PM PDT}

IPO4

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  • INFO: Beginning work on IPO4... {April 9, 2008 7:04:24 PM PDT}
  • REDIRECT: Protein Redirected to: IPO4 {April 9, 2008 7:05:14 PM PDT}
  • CREATED: Created new protein page: IPO4 {April 9, 2008 7:05:20 PM PDT}

LRRC8E

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  • INFO: Beginning work on LRRC8E... {April 9, 2008 7:10:59 PM PDT}
  • REDIRECT: Protein Redirected to: LRRC8E {April 9, 2008 7:11:33 PM PDT}
  • CREATED: Created new protein page: LRRC8E {April 9, 2008 7:11:36 PM PDT}

MOGAT2

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  • INFO: Beginning work on MOGAT2... {April 9, 2008 7:13:39 PM PDT}
  • REDIRECT: Protein Redirected to: MOGAT2 {April 9, 2008 7:14:20 PM PDT}
  • CREATED: Created new protein page: MOGAT2 {April 9, 2008 7:14:25 PM PDT}

NOL12

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  • INFO: Beginning work on NOL12... {April 9, 2008 6:58:53 PM PDT}
  • REDIRECT: Protein Redirected to: NOL12 {April 9, 2008 6:59:36 PM PDT}
  • CREATED: Created new protein page: NOL12 {April 9, 2008 6:59:40 PM PDT}

NOL9

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  • INFO: Beginning work on NOL9... {April 9, 2008 7:03:40 PM PDT}
  • REDIRECT: Protein Redirected to: NOL9 {April 9, 2008 7:04:20 PM PDT}
  • CREATED: Created new protein page: NOL9 {April 9, 2008 7:04:24 PM PDT}

OTUB2

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  • INFO: Beginning work on OTUB2... {April 9, 2008 6:57:43 PM PDT}
  • UPLOAD: Added new Image to wiki: File:PBB Protein OTUB2 image.jpg {April 9, 2008 6:58:15 PM PDT}
  • REDIRECT: Protein Redirected to: OTUB2 {April 9, 2008 6:58:22 PM PDT}
  • CREATED: Created new protein page: OTUB2 {April 9, 2008 6:58:38 PM PDT}

RHBDF2

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  • INFO: Beginning work on RHBDF2... {April 9, 2008 7:02:31 PM PDT}
  • REDIRECT: Protein Redirected to: RHBDF2 {April 9, 2008 7:03:33 PM PDT}
  • CREATED: Created new protein page: RHBDF2 {April 9, 2008 7:03:40 PM PDT}

RIC3

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  • INFO: Beginning work on RIC3... {April 9, 2008 7:01:17 PM PDT}
  • REDIRECT: Protein Redirected to: RIC3 {April 9, 2008 7:01:51 PM PDT}
  • CREATED: Created new protein page: RIC3 {April 9, 2008 7:01:55 PM PDT}

RNF128

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  • INFO: Beginning work on RNF128... {April 9, 2008 7:00:43 PM PDT}
  • REDIRECT: Protein Redirected to: RNF128 {April 9, 2008 7:01:13 PM PDT}
  • CREATED: Created new protein page: RNF128 {April 9, 2008 7:01:17 PM PDT}

TSEN34

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  • INFO: Beginning work on TSEN34... {April 9, 2008 6:58:38 PM PDT}
  • REDIRECT: Protein Redirected to: TSEN34 {April 9, 2008 6:58:47 PM PDT}
  • CREATED: Created new protein page: TSEN34 {April 9, 2008 6:58:53 PM PDT}

ULBP3

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  • INFO: Beginning work on ULBP3... {April 9, 2008 6:59:40 PM PDT}
  • UPLOAD: Added new Image to wiki: File:PBB Protein ULBP3 image.jpg {April 9, 2008 6:59:52 PM PDT}
  • REDIRECT: Protein Redirected to: ULBP3 {April 9, 2008 6:59:59 PM PDT}
  • CREATED: Created new protein page: ULBP3 {April 9, 2008 7:00:03 PM PDT}

end log.

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