Collinsella-1 RNA motif

The Collinsella-1 RNA motif denotes a particular conserved RNA structure discovered by bioinformatics.[1] Of the six sequences belonging to this motif that were originally identified, five are from uncultivated bacteria residing in the human gut, while only the sixth is in a cultivated species, Collinsella aerofaciens. The evidence supporting the stem-loops designated as "P1" and "P2" is ambiguous.

Collinsella-1 RNA
Consensus secondary structure of Collinsella-1 RNAs
Identifiers
SymbolCollinsella-1
RfamRF01700
Other data
RNA typesRNA
PDB structuresPDBe

See also

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References

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  1. ^ Weinberg Z, Wang JX, Bogue J, et al. (March 2010). "Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea and their metagenomes". Genome Biol. 11 (3): R31. doi:10.1186/gb-2010-11-3-r31. PMC 2864571. PMID 20230605.
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