Alajõe may refer to several places in Estonia:
- Alajõe Parish, municipality in Ida-Viru County
- Alajõe, Ida-Viru County, village in Alutaguse Parish, Ida-Viru County
- Alajõe, Tartu County, village in Peipsiääre Parish, Tartu County
This disambiguation page lists articles about distinct geographical locations with the same name.
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