Wikipedia:WikiProject Molecular Biology/Metabolic Pathways task force/templates

This of is a list of templates useful for the wikiproject; see further below for the code for each template.

Templates available:

• Reaction Templates:

• Template:Enzymatic reaction
• Template:Complex enzymatic reaction

• Navigation Templates:

• Template:Glycolysis
• Template:Citric acid cycle
• Template:Urea cycle
• Template:Cellular respiration
• Template:Metabolism
• Template:Protein biosynthesis
• Template:Glucose metabolism
• Template:Metabolic pathways

• Reference Templates

• Template:KEGG enzyme
• Template:KEGG compound
• Template:KEGG reaction
• Template:PDB

• Article Tags:

• {{WikiProject Molecular Biology|class=|MCB=yes|MCB=yes|MCB-importance=|MCB=yes|MCB-importance=|Metabolism-pathways=yes|Metabolism-pathways-importance=|}}
• or

Which will look like this:

• User Tags:

• Wikipedia:Wikiproject Metabolic Pathways/Userbox

• Infoboxes

• Template:Protbox
• Template:Chembox

Reaction templates

Enzymatic Reaction

Current status: Use. Complete and ready for use.

{{Enzymatic Reaction
|forward_enzyme=
|reverse_enzyme=
|substrate=
|product=
|reaction_direction_(forward/reversible/reverse)=
|minor_forward_substrate(s)=
|minor_forward_product(s)=
|minor_reverse_substrate(s)=
|minor_reverse_product(s)=
|substrate_image=
|product_image=
}}

Gives, for example:

Glucose	Hexokinase		Glucose-6-phosphate
	ATP	ADP

Complex Enzymatic reaction

Current status: Use. Complete and ready for use.

{{ Complex enzymatic reaction
|major_substrate_1=
|major_substrate_1_stoichiometric_constant=
|major_substrate_1_image=
|major_substrate_2=
|major_substrate_2_stoichiometric_constant=
|major_substrate_2_image=
|major_product_1=
|major_product_1_stoichiometric_constant=
|major_product_1_image=
|major_product_2=
|major_product_2_stoichiometric_constant=
|major_product_2_image=
|foward_enzyme=
|reverse_enzyme=
|reaction_direction_(forward/reversible/reverse)=
|minor_foward_substrate(s)=
|minor_foward_product(s)=
|minor_reverse_product(s)=
|minor_reverse_substrate(s)=
}}

Gives, for example:

A			B		{{{forward_enzyme}}}		C			D
NA		+	NB	[[image:]]			NC	[[image:]]	+	ND	[[image:{{{major_product_2_image}}}]]
					{{{minor_forward_substrate(s)}}}	{{{minor_forward_product(s)}}}
					I	J
					F

Navigation templates

{{Glycolysis}}

{{Citric acid cycle}}

{{Urea cycle}}

{{Metabolism}}

{{Protein biosynthesis}}

{{Glucose metabolism}}

{{Metabolic pathways}}

Glucuronate metabolism

Pentose interconversion

Inositol metabolism

Cellulose and sucrose
metabolism

Starch and glycogen
metabolism

Other sugar
metabolism

Pentose phosphate pathway

Glycolysis and Gluconeogenesis

Amino sugars metabolism

Small amino acid synthesis

Branched amino acid
synthesis

Purine biosynthesis

Histidine metabolism

Aromatic amino
acid synthesis

Pyruvate
decarboxylation

Fermentation

Fatty acid
metabolism

Urea cycle

Aspartate amino acid
group synthesis

Porphyrins and
corrinoids
metabolism

Citric acid cycle

Glutamate amino
acid group
synthesis

Pyrimidine biosynthesis

All pathway labels on this image are links, simply click to access the article.
A high resolution labeled version of this image is available here.

Reference templates

{{KEGG enzyme|2.7.1.69}}

Enzyme 2.7.1.69 at KEGG Pathway Database.

{{KEGG compound|C00668}}

Compound C00668 at KEGG Pathway Database.

{{KEGG reaction|R00959}

Reaction R00959 at KEGG Pathway Database.

{{PDB|1A0S}}

PDB: 1A0S​

Common Minor Substrates/Products

H₂O

H₂O

CO₂

CO₂

Inorganic Phosphate: P_i

P_i

ATP

ADP

CoA

Article tags

Stub Tag

Current status: Use. Complete and ready for use.

{{metabolism-stub}}

Article of Interest

Current status: Use. Currently as a task force under WPMCB.

For talk pages

• or {{WikiProject Molecular Biology|class=|MCB=yes|MCB-importance=|MCB=yes|MCB-importance=|mp=yes|mp-importance=|comment}}

Which will look like this:

User Tags

{{Wikipedia:Wikiproject Metabolic Pathways/Userbox}}

This user contributes to the Metabolic Pathways task force

Infoboxes

Protbox

{{Protbox
|Name=
|Photo=
|Caption=
|HGNCid=
|Symbol=
|AltSymbols=
|Chromosome=
|Arm=
|Band=
|LocusSupplementaryData =
|Gene=
|Gene_type=
|Protein_length=
|Molecular_weight=
|Structure=
|Type=
|Functions=
|Domains=
|Motifs=
|Alternative_products=
|Catalytic_activity=
|Cofactors=
|Enzyme_regulation=
|Km=
|Vmax=
|Biophysicochemical_properties=
|Diseases=
|Pharmaceuticals=
|Biotechnology=
|Taxa=
|Cells=
|Location=
|Mods=
|Names=
|Pathways=
|Interactions=
|Actions=
|Agonists=
|Antagonists=
|Accession_numbers=
|EntrezGene=
|OMIM=
|RefSeq=
|UniProt=
|PDB=
|ECnumber=
|Codes=
|Review=
|Pages=
}}

Chembox

{{chembox
|ImageFile=
|IUPACName=
|OtherNames=
|Abbreviations=
|Formula=
|MolarMass=
|CASNo=
|Density=
|Solubility=
|MeltingPt=
|BoilingPt=
|pKa=
|pKb=
|IsoelectricPt=
|DeltaHf=
|DeltaHc=
|EINECS=
|PubChem=
|SMILES=
|InChI=
}}