File:Elliptical Genetic Code.JPG

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Summary

Description

Simplified diagram showing codon bias in hydropathy - molar volume space.

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The strongest components (bias) for the encoding of anino acid residues are, in order:

C in 2nd position = small size, medium hydropathy

U in 2nd position = average size, hydrophobic

A in 2nd position = average size, hydrophilic

G in 2nd position = outlier Frank Layden (talk) 17:11, 16 October 2013 (UTC)

The y-axis is accurate (cubic Angstroms), but the x-axis could have some error from estimates of hydropathy.

More drawings and raw data at http://www.intde.org

Redrawn from Figure 4 in http://www.complexity.org.au/ci/vol01/fullen01/html/

which attributes the graph to Yang, M. M., W. J. Coleman and D. C. Youvan. 1990. In Reaction Centers of Photosynthetic Bacteria. M.-E. Michel-Beyerle. (Ed.) (Springer-Verlag, Germany) p209-218; listed by Google at [1]
Date
Source Own work
Author Doug youvan

Licensing

Public domain I, the copyright holder of this work, release this work into the public domain. This applies worldwide.
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Error in the Description

I believe this is in error: "U in 1st position = not hydrophilic". That yellow ellipse should be NGN. Please have a look and confirm. I am having this figure redrawn in vector. If you come across this edit, please tell me what to select as a license. This is my first edit on Commons and I need help. Frank Layden (talk) 17:03, 16 October 2013 (UTC)

The Serine codons with G in the 2nd position are properly included if the yellow ellipse is within NGN, which confirms the description is wrong. I am changing it now. Frank Layden (talk) 17:08, 16 October 2013 (UTC)

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29 May 2008

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Date/TimeThumbnailDimensionsUserComment
current16:36, 30 May 2008Thumbnail for version as of 16:36, 30 May 2008795 × 647 (42 KB)Doug youvanreplace image in error
01:18, 30 May 2008Thumbnail for version as of 01:18, 30 May 2008782 × 650 (44 KB)Doug youvan{{Information |Description={{en|1=All-elliptical tracing of the genetic code in hydropathy - molar volume space.}} |Source=Own work by uploader |Author=Doug youvan |Date=5/29/2008 |Permission= |other_versions= }} {{ImageUpload|full}}
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